Determining Various Viral Sequences Associated with the Genome of Date Palm (Phoenix dactylifera L.) Using RNA-Seq Data Analysis | Chapter 8 | Emerging Issues in Agricultural Sciences Vol. 9

 This member aims to reveal viruses in product tissues of date palms by developing a particular bioinformatics system. The study of RNA-Seq data can considerably advance our understanding of viruses and how they communicate with their hosts. In order to label the related plant viruses, the current work performed transcriptome studies of date touch (P. dactylifera) fruit from 20 public atheneums.  While the viruses Pittosporum cryptic bacterium-1 (PiCV-1) and Grapevine leafroll-associated bug (GLRaV) have been recognized earlier, thirty-seven additional plant viruses have existed found by utilizing a workflow analysis built in this study to discover partial nucleotide sequences of their RdRp and Replicase genes. At the nucleotide level, all of the aggressive sequences found were almost identical (100%) and many of the isolates had been amounted to GenBank. On P. dactylifera trees, still, there have happened prior reports of an intensely uncommon viral contamination. Therefore, it is necessary commotion research in order to confirm the virome of the date palm tree.

Author(s) Details:

Adnan A. Lahuf,
Department of Plant Protection, Agriculture Collage, University of Kerbala, Iraq.

Please see the link here: https://stm.bookpi.org/EIAS-V9/article/view/12616