Showing posts with label DNA methyltransferase. Show all posts
Showing posts with label DNA methyltransferase. Show all posts

Wednesday, 30 March 2022

Study on Potentiation of ATRA Activity in HL-60 Cells by Targeting Methylation Enzymes | Chapter 02 | New Frontiers in Medicine and Medical Research Vol. 11

 All Trans Retinoic Acid (ATRA) is a clinically established Differentiation Inducer (DI) for Acute Promyelocytic Leukemia (APL). Its efficacy in treating other kinds of Acute Myelocytic Leukemia (AML) is limited. ATRA targets the PML-RARA (promyelocytic leukemia/retinoic acid receptor-alpha)/DNA methyltransferase (DNMT)/Histone Deacetylase (HDAC) complex in APL, causing gene silencing to be lost and Terminal Differentiation to occur (TD). ATRA targeting of WT RARA as a single drug fails to modify the epigenetic modifications that prevent differentiation in other kinds of AML. When paired with DNMT inhibitors like 5-azacytidine, however, ATRA has better in vitro and clinical effectiveness against AML. The methylation enzyme complex (MMS), which includes Methionine Adenosyltransferase (MAT), Methyltransferase (MT), and S-Adenosylhomocysteine Hydrolase (SAHH), was previously shown to trigger differentiation in the AML M2 HL-60 cell line model. Differentiation Helper Inducers are inhibitors of the ternary methylation enzyme complex (DHIs). While they can't produce significant terminal differentiation on their own, they can help DIs work better. DHIs that destabilise SAHH enhance ATRA's ability to induce terminal differentiation in both sensitive and resistant HL-60 cells in vitro, according to this study. We also looked at Tyrosine Kinase Inhibitors (TKIs), which block the generation of SAHH's stabilising factor, and steroid analogues, which compete with SAHH's endogenous steroid stabilising factor. After treatment to 1M doses of ATRA, 72 percent of early passage (sensitive) HL-60 cells displayed induction of Terminal Differentiation (TD), whereas only 43 percent of late passage (resistant) cells did. Late passage HL-60 cell TD rose dramatically when ATRA was coupled with TKI imatinib mesylate or the steroid analogues resveratrol or -sitosterol, drugs with no innate capacity to induce differentiating, reaching 98 percent, 99 percent, and 94 percent of cells, respectively. Combinations of ATRA with cytotoxic chemotherapeutic drugs resulted in very minor improvements in TD percentages: ATRA plus topotecan: 76 percent; ATRA plus oxaliplatin: 63 percent; ATRA plus paclitaxel: 59 percent. ATRA's effects on an AML M2 cell line, and possibly other kinds of AML, were amplified when it was combined with drugs that interfere with the maintenance of the methyl group pool.


Author(S) Details

Ming C. Liau
CDA Therapeutics, CA, USA.

Jai-Hyun Kim
Chao Family Comprehensive Cancer Center, University of California, IrvineMedical Center, CA, USA.

John P. Fruehauf
Chao Family Comprehensive Cancer Center, University of California, IrvineMedical Center, CA, USA.

View Book:- https://stm.bookpi.org/NFMMR-V11/article/view/3688


Sunday, 30 January 2022

Epigenetic Drugs, and Their Virtual Screening Study Retrieved from ZINC Database Along with an AutoDock Study of the Best Inhibitor | Chapter 04 | Current Aspects in Pharmaceutical Research and Development Vol. 7

 Cancer epigenetics research has advanced significantly in the previous 30 years. From embryogenesis to adulthood, epigenetic events play a role in the human life cycle. It is important to understand that epigenetic misregulation may contribute to cancer formation, and we must continue to search for anti-neoplastic epi-drugs. Taking this into account, our first goal is to use virtual screening to find effective epi-drugs from the ZINC database, as well as to investigate the validity of virtual screening. The second goal is to use a docking experiment to investigate the binding conformation of the highest affinity ligands against macromolecules.

Our Virtual Screening by Docking (VSDK) technique and procedure were used to accomplish the virtual screening. The ZINC database downloads small compounds at random. AutoDock 4.2.6 and AutoDock Tool were utilised in the docking experiment.The successful virtual screening of the 2778 tiny molecules chosen at random from the ZINC database took eight to ten hours. The first rated inhibitors of histone H2B E76K mutant (HHEM) and DNA methyltransferase (DNMT) were 1H-1,2,4-triazole-3,5-diamine and 2-ethyl-1,3,4-oxadiazole, respectively.

Conclusion: Most of the top 10 HHEM and DNMT inhibitors have 5-member rings in their chemical structures, as determined by virtual screening. A virtual screening experiment would be considered effective if the affinity difference between the top and bottom 10 compounds was greater than two times. The histogram chart of AutoDock4 runs showed two or three hydrogen bonds in the lowest affinity region, indicating a consistent conformation docking.

Author(S) Details

Eiichi Akaho
Faculty of Pharmaceutical Sciences, Kobe Gakuin Univercity, 1-1-3 Minatojima, Chuo-ku, Kobe, 6508586, Japan.

View Book:- https://stm.bookpi.org/CAPRD-V7/article/view/5412